publications

publications in reverse chronological order.

2026

  1. Moya_20260812.png
    Population structure and punctuated genomic hyper-diversity in Caenorhabditis briggsae
    Nicolas D Moya ,  Bowen Wang ,  Robyn E Tanny , and 37 more authors
    Molecular Biology and Evolution, 2026
    PDF
  2. Wang_20260728.png
    Global genomic diversity of the selfing nematode Caenorhabditis tropicalis correlates with geography
    Bowen Wang ,  Nicolas D Moya ,  Robyn E Tanny , and 25 more authors
    GENETICS, 2026
    PDF
  3. Crombie_20260218.png
    Natural variation suggests candidate genes underlying Caenorhabditis elegans susceptibility to diverse toxicants
    Timothy A Crombie ,  Ryan McKeown ,  Samuel J Widmayer , and 12 more authors
    Toxicological Sciences, 2026
    PDF
  4. Crombie_20260108.png
    High-Throughput Toxicity Screening with C. elegans: Current Platforms, Key Advantages, and Future Directions
    Timothy A Crombie ,  Tobias Pamminger ,  Erik C Andersen , and 1 more author
    Environmental Science & Technology, 2026
    PDF

2025

  1. Carr_20250122.png
    Geographical patterns of intraspecific genetic diversity reflect the adaptive potential of the coral Pocillopora damicornis species complex
    M J Carr ,  Chelsey Kratochwill ,  Toby S Daly-Engel , and 2 more authors
    PLOS ONE, 2025
    PDF

2024

  1. Crombie_20240814.png
    Direct inference of the distribution of fitness effects of spontaneous mutations from recombinant inbred Caenorhabditis elegans mutation accumulation lines
    Timothy A Crombie ,  Moein Rajaei ,  Ayush Shekhar Saxena , and 7 more authors
    GENETICS, 2024
    PDF
  2. Crombie_20231019.png
    CaeNDR, the Caenorhabditis Natural Diversity Resource
    Timothy A Crombie ,  Ryan McKeown ,  Nicolas D Moya , and 12 more authors
    Nucleic Acids Res., Oct 2024
    Published online October 19, 2023
    PDF

2023

  1. Shaver_20230403.png
    Variation in anthelmintic responses are driven by genetic differences among diverse C. elegans wild strains
    Amanda O Shaver ,  Janneke Wit ,  Clayton M Dilks , and 4 more authors
    PLoS Pathog., Apr 2023
    PDF

2022

  1. Crombie_20220215.png
    Local adaptation and spatiotemporal patterns of genetic diversity revealed by repeated sampling of Caenorhabditis elegans across the Hawaiian Islands
    Timothy A Crombie ,  Paul Battlay ,  Robyn E Tanny , and 12 more authors
    Mol. Ecol., Apr 2022
    PDF
  2. Crombie_20220526.png
    An automated approach to quantify chemotaxis index in C. elegans
    Timothy A Crombie ,  Chido Chikuturudzi ,  Daniel E Cook , and 1 more author
    MicroPubl Biol, May 2022
    PDF
  3. Crombie_20220301.png
    A Highly Scalable Approach to Perform Ecological Surveys of Selfing Caenorhabditis Nematodes
    Timothy A Crombie ,  Robyn E Tanny ,  Claire M Buchanan , and 2 more authors
    J. Vis. Exp., Mar 2022
    PDF
  4. Widmayer_20220820.png
    C. elegans toxicant responses vary among genetically diverse individuals
    Samuel J Widmayer ,  Timothy A Crombie ,  Joy N Nyaanga , and 2 more authors
    Toxicology, Aug 2022
    PDF
  5. Fox_20220706.png
    C. elegans as a model for inter-individual variation in metabolism
    Bennett W Fox ,  Olga Ponomarova ,  Yong-Uk Lee , and 14 more authors
    Nature, Jul 2022
    PDF

2021

  1. Rajaei_20210817.png
    Mutability of mononucleotide repeats, not oxidative stress, explains the discrepancy between laboratory-accumulated mutations and the natural allele-frequency spectrum in C. elegans
    Moein Rajaei ,  Ayush Shekhar Saxena ,  Lindsay M Johnson , and 6 more authors
    Genome Res., Sep 2021
    PDF
  2. DiBernardo_20211006.png
    easyFulcrum: An R package to process and analyze ecological sampling data generated using the Fulcrum mobile application
    Matteo Di Bernardo ,  Timothy A Crombie ,  Daniel E Cook , and 1 more author
    PLoS One, Oct 2021
    PDF
  3. Nyaanga_20210812.png
    easyXpress: An R package to analyze and visualize high-throughput C. elegans microscopy data generated using CellProfiler
    Joy Nyaanga ,  Timothy A Crombie ,  Samuel J Widmayer , and 1 more author
    PLoS One, Aug 2021
    PDF
  4. Lee_20210405.png
    Balancing selection maintains hyper-divergent haplotypes in Caenorhabditis elegans
    Daehan Lee ,  Stefan Zdraljevic ,  Lewis Stevens , and 12 more authors
    Nat Ecol Evol, Apr 2021
    PDF
  5. High-throughput imaging of Caenorhabditis elegans aging using collective activity monitoring
    Anthony D Fouad ,  Matthew A Churgin ,  Julia Hayden , and 15 more authors
    Oct 2021
    bioRxiv preprint (not peer reviewed)

2019

  1. Crombie_20191203.png
    Deep sampling of Hawaiian Caenorhabditis elegans reveals high genetic diversity and admixture with global populations
    Timothy A Crombie ,  Stefan Zdraljevic ,  Daniel E Cook , and 11 more authors
    Elife, Dec 2019
    PDF
  2. Zdraljevic_20190408.png
    Natural variation in C. elegans arsenic toxicity is explained by differences in branched chain amino acid metabolism
    Stefan Zdraljevic ,  Bennett William Fox ,  Christine Strand , and 7 more authors
    Elife, Apr 2019
    PDF

2018

  1. Crombie_20181019.png
    Head-to-head comparison of three experimental methods of quantifying competitive fitness in C. elegans
    Timothy A Crombie ,  Sayran Saber ,  Ayush Shekhar Saxena , and 2 more authors
    PLoS One, Oct 2018
    PDF
  2. Yeh_20171114.png
    The mutational decay of male-male and hermaphrodite-hermaphrodite competitive fitness in the androdioecious nematode C. elegans
    Shu-Dan Yeh ,  Ayush Shekhar Saxena ,  Timothy A Crombie , and 6 more authors
    Heredity, Jan 2018
    PDF

2017

  1. Todgham_20161107.png
    The effect of temperature adaptation on the ubiquitin–proteasome pathway in notothenioid fishes
    A E Todgham ,  T A Crombie ,  and  others
    Journal of Experimental, Jan 2017
    PDF

2016

  1. Crombie_20160509.png
    Inhibition of the oxidative stress response by heat stress in Caenorhabditis elegans
    Timothy A Crombie ,  Lanlan Tang ,  Keith P Choe , and 1 more author
    J. Exp. Biol., Jul 2016
    PDF

2008

  1. Aggression frequency and intensity, independent of testosterone levels, relate to neural activation within the dorsolateral subdivision of the ventromedial …
    D Kabelik ,  T Crombie ,  and  M C Moore
    Horm. Behav., Jul 2008